A. J. Higgins, E. A. Gombocz, R. A. Stanley:
"From Correlation to Biological Understanding: Multi-modal semantic networks for biomarker discovery and qualification"
Lecture at CHI's Bio-IT World 2008 at World Trade Center,
Boston, MA, April 28-30, 2008
Lecture slides [.pdf / 8.6 MB]

E. A. Gombocz, R. A. Stanley, C. Rockey, T. Nishimura:
"Data integration framework for discovery and validation: Smart merging of experimental and public data across ontologies and taxonomies"
Poster at CHI's Bio-IT World 2008 at World Trade Center,
Boston, MA, April 28-30, 2008
Poster (portrait) [.pdf / 0.9 MB]

T. Slater, J. S. Almeida, M. Wilkinson, A. J. Higgins, E. A. Gombocz,
T. Nishimura:
"Working Group on Semantic Applications in Translational Research: Industry and academic centers of excellence join forces to build coherent networks to comprehend complex biological systems in context of personalized medicine and rational drug design"
Poster at CHI's Molecular Medicine Tri-Conference 2008 at Moscone North Convention Center,
San Francisco, CA, March 26-27, 2008
Poster (portrait) [.pdf / 1.1 MB]

E. A. Gombocz, A. J. Higgins, R. A. Stanley:
"Using semantics in biomarker discovery: Unified cross-OMICS correlation networks help scientists understanding biological functions"
Poster at CHI's Molecular Medicine Tri-Conference 2008 at Moscone North Convention Center,
San Francisco, CA, March 26-27, 2008
Poster (portrait) [.pdf / 1.5 MB]

E. Gombocz, R. Stanley:
"Processing, Annotating, and Searching; Interacting Efficiently With any Image"
Am. Biotechnology Laboratory 25 (10): (2007). [.pdf / 8.4 MB]

A. Higgins:
"Discovery of Toxicity Biomarkers through Application of Correlation Networks and Canonical Pathways"
Lecture at CHI's Biomarker Discovery Summit: Bridging the Silos in Biomarker Discovery and Validation at Loews Philadelphia Hotel, Philadelphia, PA, September 17-19, 2007
Lecture slides [.pdf / 10.2 MB]

E. Gombocz, A. Higgins:
"Discovery and Validation of Toxicity Biomarkers through Application of Correlation Networks and Canonical Pathways"
Lecture at GTCbio's Rediscovering Biomarkers: Detection, Development, and Validation at San Diego Marriot La Jolla, San Diego, CA, July 23-24, 2007
Lecture slides [.pdf / 4.5 MB]

E.Gombocz, A. Higgins:
"Discovery and Validation of Toxicity Biomarkers Using Correlation Networks and Canonical Pathways"
Poster at CHI's 8th Annual Beyond Genome at Fairmont Hotel,
San Francisco, CA, June 21-22, 2007
Poster (portrait) [.pdf / 1.2 MB]

E.Gombocz, R. Stanley, M. Travers:
"From disparate multi-disciplinary data to coherent knowledge: Informatics for systems biology-based disease profiling"
Lecture at HUPO 2006 at Long Beach Conference Center, Long Beach, CA, October 28 - November 1, 2006
Molecular & Cellular Proteomics 5 (10): S17 (2006) [Abstract 93]
Lecture slides [.pdf / 6.0 MB]

R.Stanley, E.Gombocz:
"Translational Informatics for Systems Biology"
Am. Biotechnol. Laboratory 24 (7): p.24 - 26 (2006).

R.Stanley:
"A Case Study for Integration Informatics: From Data Integration and Management to Marker-based Diagnostic Models"
Lecture at CHI's Beyond Genome 2006 at the Fairmont, San Francisco, CA, June 19-21 , 2006
Lecture slides [.pdf / 3.2 MB]

E.A. Gombocz, R.A. Stanley:
"Intelligent data: Towards systems biology for proteomics in a single system"
Poster at the 4th Annual World Congress of the Human Proteome Organization [HUPO] at the International Congress Center in Munich, Germany, August 28-September 1, 2005
Poster (portrait) [.pdf / 1.0 MB]

E.A. Gombocz, R.A. Stanley:
"Achieving interoperability in Systems Biology: New informatics methods for user-centric, lightweight integration of heterogeneous data" Poster at the 4th International Symposium on Challenges in Systems Biology at the Institute for Systems Biology in Seattle, WA, April 24-25, 2005
Abstract [.pdf / 1.5 MB]

E.Gombocz, R.Stanley:
"Bringing Life Sciences together: Lightweight, regulatory-compliant knowledge management across heterogeneous data sources" Workshop at the 229th ACS National Meeting in San Diego, CA, March 13 -17, 2005
Abstract [.pdf / 69 kB]

E.Gombocz:
" Beyond LIMS: Next Level of Scientific Information Integration and 2DE Analysis" Presentation and workshop at 21st Annual AES/AIChE Meeting Nov. 7-12, 2004 in Austin, TX
Abstract [.pdf / 531 kB]   Poster (landscape) [.pdf / 2.3 MB]

E.A. Gombocz, R.A. Stanley, R.L. Stevenson:
"From Acquisition to Identification Using Global Data Resources: Fast, Comprehensive Knowledge Building in 2-D Electrophoresis" Presentation at Lab Automation 2004 Jan.31-Feb.5, 2004 in San Jose, CA
Abstract [.pdf / 95 kB]

E.Gombocz, R.Stanley:
"2DE as Part of Integrated Proteomics: A Full System's Biology Approach" Presentation at 20th Annual AES/AIChE Meeting Nov.16-21, 2003 in San Francisco, CA
Poster (portrait) [.pdf / 626 kB]   Poster (landscape) [.pdf / 674 kB]  Full paper [.pdf / 3.2 MB]

E.Gombocz:
"From the Early Days of Automated Electrophoresis with in-Gel Assaying and Elution to New Avenues in Integrated Multidimensional Bioinformatics and Computational Biology using Intelligent Data" International NIH Workshop 'Electrophoretic Separations in Biology and Medicine: past and Future. Honoring Andreas Chrambach for 40 Years Achievements in Science', National Institutes of Health, Bethesda, MD, June 5, 2003 (2003).

R.A. Stanley, W.S. Hancock:
"Bioinformatics in the Clinic - Challenges And Opportunities For Improved Trials And Clinical Care"
Am. Biology Laboratory 3 (3): p 29-36 (2003).

W.S. Hancock, Shiaw L. Wu, R.A. Stanley, E.A. Gombocz:
"Publishing Large Proteome Dataset: Scientific Policy Meets Emerging Technologies"
Trends in Biotechnology 20 (12) (Suppl.) S34-S44 (2002).

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